from .chunk_utils import chunk_layer from .data_transforms import make_atom14_masks from .feats import atom14_to_atom37, frames_and_literature_positions_to_atom14_pos, torsion_angles_to_frames from .loss import compute_predicted_aligned_error, compute_tm from .protein import Protein as OFProtein from .protein import to_pdb from .rigid_utils import Rigid, Rotation from .tensor_utils import dict_multimap, flatten_final_dims, permute_final_dims